PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0490s0014.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 312aa    MW: 34859.8 Da    PI: 5.5077
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0490s0014.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY87.98.9e-28144204158
                          ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                          ++Dg+nWrKYGqK+++g+++pr+YYrCt++   gC ++k+v+rs+edp ++ +tY+g+H++
  Kalax.0490s0014.1.p 144 VEDGFNWRKYGQKDIQGANHPRGYYRCTHRqqaGCLATKHVQRSDEDPLLFYVTYRGKHTC 204
                          58***************************98999*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.4E-27141205IPR003657WRKY domain
SuperFamilySSF1182908.63E-25143205IPR003657WRKY domain
SMARTSM007741.8E-37144206IPR003657WRKY domain
PROSITE profilePS5081123.284145202IPR003657WRKY domain
PfamPF031069.7E-26145204IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MAMVMSGGRQ EEQIWENYSS KIIVSNEIQR GVEAAKSLRI LLMHHHHLNL LSNSQLSSSA  60
QVLLEEIISS SERALSILKS CCQPGDASVN NIADCENIHN QQFLISTILQ KYLTYDDVVF  120
RKSTMMKFTK QVRVSLETGF DGTVEDGFNW RKYGQKDIQG ANHPRGYYRC THRQQAGCLA  180
TKHVQRSDED PLLFYVTYRG KHTCYSQSET PPLLLPNRND NLGQHYQTTC TTNTKADADV  240
SLPPFPDDIY LLASSSSLLP EDNVGHFDSA GCCFQQDQNS PAGISESQVE SCPDSDDGSH  300
VSFDLSNYVL F*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A8e-16131202269WRKY transcription factor 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.13e-30WRKY DNA-binding protein 30